If you can see and feel vibration with either engine in gear, you have confirmed a problem.
Ok sounds like you have confirmed misalignment as the problem since your props are good. sounds like your shafts are also not the problem.....when you use feeler gauges and turn the shaft 1/2 turn for another measurement, that will be your confirmation. Jarret omitted that step and it's crucial to confirm your shaft is true!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Subsequent adjustments do not require 1/2 rotation confirmation...
My post #3 and your post # 12 explain the process....you need a fine touch with the feeler gauges and an understanding of how flange misalignment translates into necessary movement of the engine...you also need some form of power lifting to lift the HEAVY engine and transmission...crowbar, chain hoist or maybe hydraulic lift if you can borrow one...USE CAUTION WHEN LIFTING SINCE IT IS EASY TO UNINTENTIONALLY MOVE THE ENGINE SIDE TO SIDE....
I forget if I posted ALREADY: but,YES, usually the aft mounts sink LOW...I agree with the post #12 as rear mounts carry most of the weight... that means: the shaft flange is higher than the transmission flange and also the bottom of the flange is more widely separated than the top as measured by feeler gauge...hence lifting the back of the engine corrects both misalignments.
Some tricks: have a pencil and pad a record every measure in sequence....after a 1/2 rotation of the shaft and eight measures you don't want to guess wrong before lifting the engine,placing shims, and lowering again...use a sketch if necessary to show results.....After three or four possible sequences, a record can help you tell if you are getting closer!!!!!
When rotating the shaft do not lean DOWN on it...try to rotate without pressing up of down or side to side....never step on a disconnected shaft!!!!
Weight is likely 3500 lbs...figure 2500 aft to be safe...use appropriate lifting gear...
Sounds like your engines might be 1/2" low at the rear...
When I have done engines in the past I have used thin pieces of stainless or aluminum sheet....maybe 1/32" or 1/16"...whatever it was, I cut it with tin snips ahead of time....Home Cheapo has aluminum sheets maybe 2x 3 ft which is PLENTY...cut to the size you need to place under your mounts....likely you could also have one or two thick pieces made for each side ...say a pair of 1/4" thick blocks for each aft engine mount...4 in total..
Figure two days work...deciding how to lift, getting it aboard, setting that up, loosening engine mounts, disassembly of transmissiion flanges, measuring, placing shims, retightening mounts....rear seal??
Comments
Your mounts shown some corrosion...has the water been eliminated? I place a plastic container under my raw water pumps and glued in a clear vinyl hose to a can in the bilge...any water in the can and I know I have a raw water pump seal leak...but not dribbles on my transmission and mounts.
A product like RUST ARRESTOR (Home Cheapo) will chemically change the rust to an oxygen proof seal stopping further corrosion.....can then be painted....
Also, someone posted about rear transmission seal being wobbly?? never heard of that without a spray of transmission oil at the aft of the transmission...look around for it...it appears as a line either side of the transmission just ahead of the flange we have been discussing...